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Addeh, A., Khoury, Y. A., Mezgebo, B. K., Schmid, S., Pike, G. B., & MacDonald, M. E. (2025). Reconstructing heart rate variation from bold-fMRI using 1d-cnn and gru networks with dynamic functional connectivity-based rois. 2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI), 1–5. https://doi.org/10.1109/ISBI60581.2025.10981268

Addeh, A., Vega, F., Morshedi, A., Williams, R. J., Pike, G. B., & MacDonald, M. E. (2025). Machine learning‐based estimation of respiratory fluctuations in a healthy adult population using resting state BOLD fMRI and head motion parameters. Magnetic Resonance in Medicine, 93(3), 1365–1379. https://doi.org/10.1002/mrm.30330

Addeh, A., Williams, R. J., Golestani, A., Pike, G. B., & MacDonald, M. E. (2025). Physiological confounds in bold‐fMRI and their correction. NMR in Biomedicine, 38(7), 1–27. https://doi.org/10.1002/nbm.70076

Aghamohammadi-Sereshki, A., McMorris, C. A., Gibbard, W. B., Tortorelli, C., Pike, G. B., & Lebel, C. (2025). Properties of the prefrontal tracts and cingulum bundle in children with prenatal alcohol exposure. Journal of Affective Disorders, 369, 164–173. https://doi.org/10.1016/j.jad.2024.09.165

Bevington, C. W. J., Cheng, J.-C., Williams, R. J., Zhang, J., Luh, W.-M., Pike, G. B., & Sossi, V. (2025). Feature space-guided denoising of noisy 4d data: Applications to dynamic pet imaging and dual-calibrated functional MRI. IEEE Transactions on Radiation and Plasma Medical Sciences, 1–1. https://doi.org/10.1109/TRPMS.2025.3608506

Campbell, J. S. W., Baete, S. H., Cohen-Adad, J., Tournier, J.-D., Szczepankiewicz, F., Beaulieu, C., Baron, C. A., Mani, M., Setsompop, K., Liao, C., Tardif, C. L., Vos, S. B., Yendiki, A., Leppert, I. R., Fieremans, E., De Luca, A., Leemans, A., & Pike, G. B. (2025). Diffusion MRI acquisition for tractography: Beyond the in vivo adult human brain. In Handbook of Diffusion MR Tractography (pp. 143–149). Elsevier. https://doi.org/10.1016/B978-0-12-818894-1.00026-4

Campbell, J. S. W., Baete, S. H., Cohen-Adad, J., Tournier, J.-D., Szczepankiewicz, F., Beaulieu, C., Baron, C. A., Mani, M., Setsompop, K., Liao, C., Tardif, C. L., Vos, S. B., Yendiki, A., Leppert, I. R., Fieremans, E., & Pike, G. B. (2025a). Diffusion MRI acquisition for tractography: Diffusion encoding. In Handbook of Diffusion MR Tractography (pp. 103–121). Elsevier. https://doi.org/10.1016/B978-0-12-818894-1.00001-X

Campbell, J. S. W., Baete, S. H., Cohen-Adad, J., Tournier, J.-D., Szczepankiewicz, F., Beaulieu, C., Baron, C. A., Mani, M., Setsompop, K., Liao, C., Tardif, C. L., Vos, S. B., Yendiki, A., Leppert, I. R., Fieremans, E., & Pike, G. B. (2025b). Diffusion MRI acquisition for tractography: Diffusion sequences. In Handbook of Diffusion MR Tractography (pp. 123–141). Elsevier. https://doi.org/10.1016/B978-0-12-818894-1.00019-7

Cohen, A. D., Moia, S., Pike, G. B., Caballero-Gaudes, C., & Wang, Y. (2025). Resting state BOLD-perfusion coupling patterns using multiband multi-echo pseudo-continuous arterial spin label imaging. Scientific Reports, 15(1), 2108. https://doi.org/10.1038/s41598-024-81305-1

Ferguson, A. S., Nishino, T., Girault, J. B., Hazlett, H. C., Schultz, R. T., Marrus, N., Styner, M., Torres-Gomez, S., Gerig, G., Evans, A., Dager, S. R., Estes, A. M., Zwaigenbaum, L., Pandey, J., John, T. St., Piven, J., Pruett, J. R., & Todorov, A. A. (2025). Statistical properties of functional connectivity MRI enrichment analysis in school-age autism research. Developmental Cognitive Neuroscience, 72, 101534. https://doi.org/10.1016/j.dcn.2025.101534

Guan, D. X., Peters, M. E., Pike, G. B., Ballard, C., Creese, B., Corbett, A., Pickering, E., Roach, P., Smith, E. E., & Ismail, Z. (2025). Cognitive, behavioral, and functional outcomes of suspected mild traumatic brain injury in community-dwelling older persons without mild cognitive impairment or dementia. Journal of the Academy of Consultation-Liaison Psychiatry, 66(2), 118–129. https://doi.org/10.1016/j.jaclp.2024.12.004

Kiss, Z., Arantes, A., Adeoti, J., Coreas, A., Sheth, N., Swytink-Binnema, C., Shrestha, S., Martino, D., Pichardo, S., & Pike, G. B. (2025). Tremor reduction using a multi-focus transcranial ultrasound stimulation system targeting thalamus: Preliminary results. Brain Stimulation, 18(4), 1343. https://doi.org/10.1016/j.brs.2025.05.042

Li, M., Chen, C., Li, Z., Liu, Y., Shan, S., Wu, P., Rong, P., Liu, F., Pike, G. B., Wilman, A. H., Sun, H., & Gao, Y. (2025). Susep-net: Simulation-supervised and contrastive learning-based deep neural networks for susceptibility source separation. arXiv. https://doi.org/10.48550/ARXIV.2506.13293

Lu, W. D., Nelson, M. C., Leppert, I. R., Campbell, J. S. W., Schiavi, S., Pike, G. B., Rowley, C. D., Daducci, A., & Tardif, C. L. (2025). Mapping the aggregate g-ratio of white matter tracts using multi-modal MRI. Imaging Neuroscience, 3, IMAG.a.49. https://doi.org/10.1162/IMAG.a.49

Maunder, A., Mclean, M., Pichardo, S., Pike, G. B., Robb, F. J. L., Iyer, A. K., & De Zanche, N. (2025). An eight-channel MRI head coil array for enhanced MRI-guided transcranial focused ultrasound imaging performance. IEEE Access, 13, 67500–67510. https://doi.org/10.1109/ACCESS.2025.3559052

Meera, S. S., Swaminathan, D., Pawar, R., Yankowitz, L., Donovan, K., Khuu, K., Parish-Morris, J., Warren, S. F., Estes, A., Zwaigenbaum, L., Clements, M., Anderson, D. V., Schultz, R. T., Hazlett, H. C., John, T. St., Pandey, J., Marrus, N., Botteron, K., Dager, S. R., … Piven, J. (2025). Evaluating canonical babbling ratios extracted from day-long audio recordings in infants later diagnosed with autism spectrum disorder. Infant Behavior and Development, 79, 102059. https://doi.org/10.1016/j.infbeh.2025.102059

Moraglia, L. E., Weigman, B., Abdi, H., Styner, M., Kim, S. H., Burrows, C. A., Shen, M. D., Ravi, S., Wolff, J. J., Dager, S. R., Hazlett, H. C., Pandey, J., Schultz, R. T., Girault, J. B., Botteron, K. N., Marrus, N., Estes, A. M., St. John, T., Zheng, G., … the IBIS Network. (2025). Brain morphometry in infants later diagnosed with autism is related to later language skills. Human Brain Mapping, 46(7), e70221. https://doi.org/10.1002/hbm.70221

Park, S. D., McCreary, C. R., Gee, M., Mazerolle, E. L., Frayne, R., Ismail, Z., Jickling, G., Camicioli, R., Pike, G. B., Smith, E. E., & Beaudin, A. E. (2025). Association between glymphatic function and cerebrovascular reactivity in patients with cerebral amyloid angiopathy and Alzheimer’s disease. Alzheimer’s & Dementia, 21(S1), e099499. https://doi.org/10.1002/alz70855_099499

Pruett Jr., J. R., Todorov, A. A., Hawks, Z. W., Talovic, M., Nishino, T., Petersen, S. E., Davis, S., Stahl, L., Botteron, K. N., Constantino, J. N., Dager, S. R., Elison, J. T., Estes, A. M., Evans, A. C., Gerig, G., Girault, J. B., Hazlett, H., MacIntyre, L., Marrus, N., … for the IBIS Network. (2025). Brain functional connectivity correlates of autism diagnosis and familial liability in 24-month-olds. Journal of Neurodevelopmental Disorders, 17(1), 40. https://doi.org/10.1186/s11689-025-09621-9

Wu, D., Moraglia, L. E., Ravi, S., Elison, J. T., Wolff, J. J., Estes, A., John, T. St., Zwaigenbaum, L., Marrus, N., Hazlett, H., Schultz, R., Botteron, K., Dager, S. R., Abdi, H., Piven, J., & Swanson, M. R. (2025). Clarifying the developmental association between gesture and later vocabulary for autistic children. Infant Behavior and Development, 79, 102058. https://doi.org/10.1016/j.infbeh.2025.102058

Zadeh, A. K., Raghuram, H., Shrestha, S., Kibreab, M., Kathol, I., Martino, D., Pike, G. B., Pichardo, S., & Monchi, O. (2025). The effect of transcranial ultrasound pulse repetition frequency on sustained inhibition in the human primary motor cortex: A double-blind, sham-controlled study. Brain Stimulation, 18(1), 363. https://doi.org/10.1016/j.brs.2024.12.448

Zawari, A., Rockel, C., Clark, D., Ardila, M., Pike, B., Pichardo, S., Adams, B., & Kiss, Z. (2025). P.198 Outcomes and connectivity changes in treatment-resistant OCD after MR-guided focused ultrasound capsulotomy. Canadian Journal of Neurological Sciences / Journal Canadien Des Sciences Neurologiques, 52(s1), S61–S61. https://doi.org/10.1017/cjn.2025.10330

Addeh, A., Pike, G. B., & MacDonald, M. E. (2024). The useful side of motion: Using head motion parameters to correct for respiratory confounds in bold fMRI. arXiv. https://doi.org/10.48550/ARXIV.2410.19802

Addeh, A., Vega, F., Williams, R. J., Pike, G. B., & MacDonald, M. E. (2024). Machine learning-based estimation of respiratory fluctuations in a healthy adult population using bold fMRI and head motion parameters. arXiv. https://doi.org/10.48550/ARXIV.2405.00219

Burrows, C. A., Lasch, C., Gross, J., Girault, J. B., Rutsohn, J., Wolff, J. J., Swanson, M. R., Lee, C. M., Dager, S. R., Cornea, E., Stephens, R., Styner, M., John, T. St., Pandey, J., Deva, M., Botteron, K. N., Estes, A. M., Hazlett, H. C., Pruett, J. R., … Elison, J. T. (2024). Associations between early trajectories of amygdala development and later school-age anxiety in two longitudinal samples. Developmental Cognitive Neuroscience, 65, 101333. https://doi.org/10.1016/j.dcn.2023.101333

Fairbanks, T., Zadeh, A. K., Raghuram, H., Coreas, A., Shrestha, S., Li, S., Pike, G. B., Girgis, F., & Pichardo, S. (2024). Pipeline for planning and execution of transcranial ultrasound neuromodulation experiments in humans. Journal of Visualized Experiments, (208), 66972. https://doi.org/10.3791/66972 

Gao, Y., Xiong, Z., Shan, S., Liu, Y., Rong, P., Li, M., Wilman, A. H., Pike, G. B., Liu, F., & Sun, H. (2024). Plug-and-Play latent feature editing for orientation-adaptive quantitative susceptibility mapping neural networks. Medical Image Analysis, 94, 103160. https://doi.org/10.1016/j.media.2024.103160

García-Marín, L. M., Campos, A. I., Diaz-Torres, S., Rabinowitz, J. A., Ceja, Z., Mitchell, B. L., Grasby, K. L., Thorp, J. G., Agartz, I., Alhusaini, S., Ames, D., Amouyel, P., Andreassen, O. A., Arfanakis, K., Arias-Vasquez, A., Armstrong, N. J., Athanasiu, L., Bastin, M. E., Beiser, A. S., … Rentería, M. E. (2024). Genomic analysis of intracranial and subcortical brain volumes yields polygenic scores accounting for variation across ancestries. Nature Genetics, 56(11), 2333–2344. https://doi.org/10.1038/s41588-024-01951-z

Guan, D. X., Mortby, M. E., Pike, G. B., Ballard, C., Creese, B., Corbett, A., Pickering, E., Hampshire, A., Roach, P., Smith, E. E., & Ismail, Z. (2024). Linking cognitive and behavioral reserve: Evidence from the CAN‐PROTECT study. Alzheimer’s & Dementia: Translational Research & Clinical Interventions, 10(4), e12497. https://doi.org/10.1002/trc2.12497

Guan, D. X., Rehman, T., Nathan, S., Durrani, R., Potvin, O., Duchesne, S., Pike, G. B., Smith, E. E., & Ismail, Z. (2024). Neuropsychiatric symptoms: Risk factor or disease marker? A study of structural imaging biomarkers of Alzheimer’s disease and incident cognitive decline. Human Brain Mapping, 45(13), e70016. https://doi.org/10.1002/hbm.70016

Gunderson, J., Symons, F., Kohli, N., Grzadzinski, R., Burrows, C., Estes, A., Dager, S., Piven, J., Wolff, J., & IBIS Network. (2024). Longitudinal analysis of sensory responsivity from infancy to school age in children at high and low familial likelihood for autism. JCPP Advances, 4(2), e12227. https://doi.org/10.1002/jcv2.12227

Knol, M. J., Poot, R. A., Evans, T. E., Satizabal, C. L., Mishra, A., Sargurupremraj, M., Van Der Auwera, S., Duperron, M.-G., Jian, X., Hostettler, I. C., Van Dam-Nolen, D. H. K., Lamballais, S., Pawlak, M. A., Lewis, C. E., Carrion-Castillo, A., Van Erp, T. G. M., Reinbold, C. S., Shin, J., Scholz, M., … Adams, H. H. H. (2024). Genetic variants for head size share genes and pathways with cancer. Cell Reports Medicine, 5(5), 101529. https://doi.org/10.1016/j.xcrm.2024.101529

Navarri, X., Robertson, D. N., Charfi, I., Wünnemann, F., Sâmia Fernandes Do Nascimento, A., Trottier, G., Leclerc, S., Andelfinger, G. U., Di Cristo, G., Richer, L., Pike, G. B., Pausova, Z., Piñeyro, G., & Paus, T. (2024). Cells and molecules underpinning cannabis-related variations in cortical thickness during adolescence. The Journal of Neuroscience, 44(41), e2256232024. https://doi.org/10.1523/JNEUROSCI.2256-23.2024

Pellow, C., Pichardo, S., & Pike, G. B. (2024). A systematic review of preclinical and clinical transcranial ultrasound neuromodulation and opportunities for functional connectomics. Brain Stimulation, 17(4), 734–751. https://doi.org/10.1016/j.brs.2024.06.005

Romme, C. J. A., Stanley, E. A. M., Mouches, P., Wilms, M., Pike, G. B., Metz, L. M., & Forkert, N. D. (2024). Analysis and visualization of the effect of multiple sclerosis on biological brain age. Frontiers in Neurology, 15, 1423485. https://doi.org/10.3389/fneur.2024.1423485

Rowley, C. D., Nelson, M. C., Campbell, J. S. W., Leppert, I. R., Pike, G. B., & Tardif, C. L. (2024). Fast magnetization transfer saturation imaging of the brain using MP2RAGE T₁ mapping. Magnetic Resonance in Medicine, 92(4), 1540–1555. https://doi.org/10.1002/mrm.30143 

Seasons, G. M., Pellow, C., Kuipers, H. F., & Pike, G. B. (2024). Ultrasound and neuroinflammation: Immune modulation via the heat shock response. Theranostics, 14(8), 3150–3177. https://doi.org/10.7150/thno.96270

Stanley, E. A. M., Souza, R., Winder, A. J., Wilms, M., Pike, G. B., Dagasso, G., Nielsen, C., MacEachern, S. J., & Forkert, N. D. (2025). Assessing the impact of sociotechnical harms in ai-based medical image analysis. In E. Puyol-Antón, G. Zamzmi, A. Feragen, A. P. King, V. Cheplygina, M. Ganz-Benjaminsen, E. Ferrante, B. Glocker, E. Petersen, J. S. H. Baxter, I. Rekik, & R. Eagleson (Eds.), Ethics and Fairness in Medical Imaging (pp. 163–175). Springer Nature Switzerland. https://doi.org/10.1007/978-3-031-72787-0_16

Swytink-Binnema, C. A., Coreas, A., Pichardo, S., Pike, G. B., & Kiss, Z. H. T. (2024). An intraoperative accelerometry and real-time analysis tool for magnetic resonance–guided focused ultrasound thalamotomy. Journal of Neurosurgery, 141(4), 1088–1095. https://doi.org/10.3171/2024.1.JNS231830

Worthley, E., Grzadzinski, R., Zwaigenbaum, L., Dager, S. R., Estes, A. M., Hazlett, H. C., Schultz, R. T., Piven, J., Wolff, J. J., & IBIS Network. (2024). Sensory profiles in relation to later adaptive functioning among toddlers at high-familial likelihood for autism. Journal of Autism and Developmental Disorders, 54(6), 2183–2197. https://doi.org/10.1007/s10803-022-05869-5

Wu, D., Wolff, J. J., Ravi, S., Elison, J. T., Estes, A., Paterson, S., St. John, T., Abdi, H., Moraglia, L. E., Piven, J., Swanson, M. R., & for the IBIS Network. (2024). Infants who develop autism show smaller inventories of deictic and symbolic gestures at 12 months of age. Autism Research, 17(4), 838–851. https://doi.org/10.1002/aur.3092

Zadeh, A. K., Raghuram, H., Shrestha, S., Kibreab, M., Kathol, I., Martino, D., Pike, G. B., Pichardo, S., & Monchi, O. (2024). The effect of transcranial ultrasound pulse repetition frequency on sustained inhibition in the human primary motor cortex: A double-blind, sham-controlled study. Brain Stimulation, 17(2), 476–484. https://doi.org/10.1016/j.brs.2024.04.005

Zhang, Y., Liu, W.-Q., Hosseinpour, Z., Pike, G. B., Cerchiaro, G., Greenfield, J., Yong, V. W., & Metz, L. M. (2024). Feasibility study to assess lesion repair in relapsing-remitting multiple sclerosis: A randomized controlled pilot clinical trial of domperidone add-on treatment. Multiple Sclerosis and Related Disorders, 85, 105525. https://doi.org/10.1016/j.msard.2024.105525

Addeh, A., Vega, F., Medi, P. R., Williams, R. J., Pike, G. B., & MacDonald, M. E. (2023). Direct machine learning reconstruction of respiratory variation waveforms from resting state fMRI data in a pediatric population. NeuroImage, 269, 119904. https://doi.org/10.1016/j.neuroimage.2023.119904

Addeh, A., Vega, F., Williams, R. J., Golestani, A., Pike, G. B., & MacDonald, M. E. (2023). Using bold-fMRI to compute the respiration volume per time (Rtv) and respiration variation (Rv) with convolutional neural networks (Cnn) in the human connectome development cohort (arXiv:2307.05426). arXiv. https://doi.org/10.48550/arXiv.2307.05426

Bontempi, P., Leppert, I., Schiavi, S., Campbell, J., Nelson, M., Pike, B., Tardif, C., & Daducci, A. (2023). Investigating the feasibility of assessing magnetization transfer properties of distinct white-matter connections. St Alban-Anlage 66, CH-4052 Basel, Switzerland. https://doi.org/10.3390/neurolint15010028

Burles, F., Williams, R., Berger, L., Pike, G. B., Lebel, C., & Iaria, G. (2023). The unresolved methodological challenge of detecting neuroplastic changes in astronauts. Life, 13(2), 500. https://doi.org/10.3390/life13020500

Chen, C.-H., Khnaijer, M. K., Beaudin, A. E., McCreary, C. R., Gee, M., Saad, F., Frayne, R., Ismail, Z., Pike, G. B., Camicioli, R., & Smith, E. E. (2023). Subcortical volumes in cerebral amyloid angiopathy compared with Alzheimer’s disease and controls. Frontiers in Neuroscience, 17. https://doi.org/10.3389/fnins.2023.1139196

Dimian, A. F., Estes, A. M., Dager, S., Piven, J., Wolff, J. J., & for the IBIS Network. (2023). Predicting self‐injurious behavior at age three among infant siblings of children with autism. Autism Research, 16(9), 1670–1680. https://doi.org/10.1002/aur.2981 

Estrada, K. A., Govindaraj, S., Abdi, H., Moraglia, L. E., Wolff, J. J., Meera, S. S., Dager, S. R., McKinstry, R. C., Styner, M. A., Zwaigenbaum, L., Piven, J., & Swanson, M. R. (2023). Language exposure during infancy is negatively associated with white matter microstructure in the arcuate fasciculus. Developmental Cognitive Neuroscience, 61, 101240. https://doi.org/10.1016/j.dcn.2023.101240

Guan, D. X., Rehman, T., Nathan, S., Durrani, R., Potvin, O., Duchesne, S., Pike, G. B., Smith, E. E., & Ismail, Z. (2023). Further along the Alzheimer’s disease continuum: Associations between mild behavioral impairment with hippocampal and entorhinal volume and incident cognitive decline. Alzheimer’s & Dementia, 19(S18), e079029. https://doi.org/10.1002/alz.079029

Guan, D. X., Smith, E. E., Pike, G. B., & Ismail, Z. (2023a). Persistence of neuropsychiatric symptoms and dementia prognostication: A comparison of three operational case definitions of mild behavioral impairment. Alzheimer’s & Dementia: Diagnosis, Assessment & Disease Monitoring, 15(4), e12483. https://doi.org/10.1002/dad2.12483

Guan, D. X., Smith, E. E., Pike, G. B., & Ismail, Z. (2023b). Persistence of neuropsychiatric symptoms and dementia prognostication: A comparison of three operational definitions of mild behavioral impairment. https://doi.org/10.1101/2023.04.08.23287454

Hawks, Z. W., Todorov, A., Marrus, N., Nishino, T., Talovic, M., Nebel, M. B., Girault, J. B., Davis, S., Marek, S., Seitzman, B. A., Eggebrecht, A. T., Elison, J., Dager, S., Mosconi, M. W., Tychsen, L., Snyder, A. Z., Botteron, K., Estes, A., Evans, A., … Pruett, J. R. (2023). A prospective evaluation of infant cerebellar-cerebral functional connectivity in relation to behavioral development in autism spectrum disorder. Biological Psychiatry Global Open Science, 3(1), 149–161. https://doi.org/10.1016/j.bpsgos.2021.12.004

Hosseinpour, Z., Oladosu, O., Liu, W., Pike, G. B., Yong, V. W., Metz, L. M., & Zhang, Y. (2023). Distinct characteristics and severity of brain magnetic resonance imaging lesions in women and men with multiple sclerosis assessed using verified texture analysis measures. Frontiers in Neurology, 14. https://doi.org/10.3389/fneur.2023.1213377

Leppert, I. R., Bontempi, P., Rowley, C. D., Campbell, J. S. W., Nelson, M. C., Schiavi, S., Pike, G. B., Daducci, A., & Tardif, C. L. (2023). Dual-encoded magnetization transfer and diffusion imaging and its application to tract-specific microstructure mapping. Imaging Neuroscience, 1, imag–1–00019. https://doi.org/10.1162/imag_a_00019

Navarri, X., Vosberg, D. E., Shin, J., Richer, L., Leonard, G., Pike, G. B., Banaschewski, T., Bokde, A. L. W., Desrivières, S., Flor, H., Grigis, A., Garavan, H., Gowland, P., Heinz, A., Brühl, R., Martinot, J.-L., Martinot, M.-L. P., Artiges, E., Nees, F., … Paus, T. (2023). A biologically informed polygenic score of neuronal plasticity moderates the association between cognitive aptitudes and cortical thickness in adolescents. Developmental Cognitive Neuroscience, 60, 101232. https://doi.org/10.1016/j.dcn.2023.101232

Nelson, M. C., Royer, J., Lu, W. D., Leppert, I. R., Campbell, J. S. W., Schiavi, S., Jin, H., Tavakol, S., Vos De Wael, R., Rodriguez-Cruces, R., Pike, G. B., Bernhardt, B. C., Daducci, A., Misic, B., & Tardif, C. L. (2023). The human brain connectome weighted by the myelin content and total intra-axonal cross-sectional area of white matter tracts. Network Neuroscience, 7(4), 1363–1388. https://doi.org/10.1162/netn_a_00330

Pellow, C., Li, S., Delgado, S., Pike, G. B., Curiel, L., & Pichardo, S. (2023). Biaxial ultrasound driving technique for small animal blood–brain barrier opening. Physics in Medicine & Biology, 68(19), 195006. https://doi.org/10.1088/1361-6560/acf2e3

Pichardo, S., Nankoo, J.-F., Zadeh, A. K., Darmani, G., Martino, D., Monchi, O., Chen, R., & Pike, G. B. (2023). Relevance of transcranial modeling in the planning of neurostimulation with low intensity focused ultrasound for deep targets. Brain Stimulation, 16(1), 153. https://doi.org/10.1016/j.brs.2023.01.119

Ravi, S., Bradshaw, A., Abdi, H., Meera, S. S., Parish-Morris, J., Yankowitz, L., Paterson, S., Dager, S. R., Burrows, C. A., Chappell, C., St. John, T., Estes, A. M., Piven, J., Swanson, M. R., & The IBIS Network. (2023). Corrigendum: Are early social communication skills a harbinger for language development in infants later diagnosed autistic? —A longitudinal study using a standardized social communication assessment. Frontiers in Communication, 8. https://doi.org/10.3389/fcomm.2023.1120237

Rowley, C. D., Campbell, J. S. W., Leppert, I. R., Nelson, M. C., Pike, G. B., & Tardif, C. L. (2023). Optimization of acquisition parameters for cortical inhomogeneous magnetization transfer (Ihmt) imaging using a rapid gradient echo readout. Magnetic Resonance in Medicine, 90(5), 1762–1775. https://doi.org/10.1002/mrm.29754 

Rowley, C. D., Nelson, M. C., Campbell, J. S. W., Leppert, I. R., Pike, G. B., & Tardif, C. L. (2023). Correcting for t1 bias in magnetization transfer saturation (Mtsat) maps using sparse-mp2rage (arXiv:2310.09102). arXiv. https://doi.org/10.48550/arXiv.2310.09102

Smith, S., Bergmann, T. O., Forstmann, B., Dagher, A., Keilholz, S., Kennedy, K., Kotz, S. A., Lustig, C., Pike, B., Tittgemeyer, M., Woolrich, M., Yeo, B. T. T., Alexander, A., Bijsterbosch, J., Boonstra, T., Chakravarty, M., Chambers, C., Chang, C., Christian, B., … Yendiki, A. (2023). Imaging neuroscience opening editorial. Imaging Neuroscience, 1, imag–1–00007. https://doi.org/10.1162/imag_e_00007

Sondergaard, R. E., Rockel, C. P., Cortese, F., Pike, G. B., Kiss, Z. H. T., & Martino, D. (2023). Asymmetry of the dentato‐rubro‐thalamic tracts in cervical dystonia. Movement Disorders, 38(10), 1970–1972. https://doi.org/10.1002/mds.29594 

Souza, R., Wilms, M., Camacho, M., Pike, G. B., Camicioli, R., Monchi, O., & Forkert, N. D. (2023). Image-encoded biological and non-biological variables may be used as shortcuts in deep learning models trained on multisite neuroimaging data. Journal of the American Medical Informatics Association, 30(12), 1925–1933. https://doi.org/10.1093/jamia/ocad171

St. John, T., Estes, A. M., Hazlett, H. C., Marrus, N., Burrows, C. A., Donovan, K., Torres Gomez, S., Grzadzinski, R. L., Parish-Morris, J., Smith, R., Styner, M., Garic, D., Pandey, J., Lee, C. M., Schultz, R. T., Botteron, K. N., Zwaigenbaum, L., Piven, J., Dager, S. R., … Fonov, V. (2023). Association of sex with neurobehavioral markers of executive function in 2-year-olds at high and low likelihood of autism. JAMA Network Open, 6(5), e2311543. https://doi.org/10.1001/jamanetworkopen.2023.11543

Stallworthy, I. C., Berry, D., Davis, S., Wolff, J. J., Burrows, C. A., Swanson, M. R., Grzadzinski, R. L., Botteron, K., Dager, S. R., Estes, A. M., Schultz, R. T., Piven, J., Elison, J. T., Pruett, J. R., Marrus, N., & for The IBIS Network. (2023). Quantifying latent social motivation and its associations with joint attention and language in infants at high and low likelihood for autism spectrum disorder. Developmental Science, 26(3), e13336. https://doi.org/10.1111/desc.13336

Swytink‐Binnema, C. A., Rockel, C. P., Martino, D., Dukelow, S. P., Pike, G. B., & Kiss, Z. H. T. (2023). Limb preference changes after focused‐ultrasound thalamotomy for tremor. Movement Disorders, 38(5), 831–842. https://doi.org/10.1002/mds.29350

Wang, Q., Aljassar, M., Bhagwat, N., Zeighami, Y., Evans, A. C., Dagher, A., Pike, G. B., Sadikot, A. F., & Poline, J.-B. (2023). Reproducibility of cerebellar involvement as quantified by consensus structural MRI biomarkers in advanced essential tremor. Scientific Reports, 13(1), 581. https://doi.org/10.1038/s41598-022-25306-y

Williams, R. J., Specht, J. L., Mazerolle, E. L., Lebel, R. M., MacDonald, M. E., & Pike, G. B. (2023). Correspondence between BOLD fMRI task response and cerebrovascular reactivity across the cerebral cortex. Frontiers in Physiology, 14. https://doi.org/10.3389/fphys.2023.1167148

Yang, R., Hamilton, A. M., Sun, H., Rawji, K. S., Sarkar, S., Mirzaei, R., Pike, G. B., Yong, V. Wee., & Dunn, J. F. (2023). Detecting monocyte trafficking in an animal model of glioblastoma using R2* and quantitative susceptibility mapping. Cancer Immunology, Immunotherapy, 72(3), 733–742. https://doi.org/10.1007/s00262-022-03297-z

Aghamohammadi-Sereshki, A., McMorris, C. A., Ben Gibbard, W., Tortorelli, C., Pike, G. B., & Lebel, C. (2022). Effects of prenatal alcohol exposure on neurobehavioural development and volume of rostral cingulate cortex subregions. Journal of Psychiatry and Neuroscience, 47(4), E272–E282. https://doi.org/10.1503/jpn.210198

Beaudin, A. E., McCreary, C. R., Mazerolle, E. L., Gee, M., Sharma, B., Subotic, A., Zwiers, A. M., Cox, E., Nelles, K., Charlton, A., Frayne, R., Ismail, Z., Beaulieu, C., Jickling, G. C., Camicioli, R. M., Pike, G. B., & Smith, E. E. (2022). Cerebrovascular reactivity across the entire brain in cerebral amyloid angiopathy. Neurology, 98(17). https://doi.org/10.1212/WNL.0000000000200136

Bevington, C. W. J., Cheng, J.-C. K., Williams, R. J., Bruce Pike, G., & Sossi, V. (2022). Multimodal hypr-based denoising for improving brain pattern analysis. 2022 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), 1–3. https://doi.org/10.1109/NSS/MIC44845.2022.10399081

Burrows, C. A., Grzadzinski, R. L., Donovan, K., Stallworthy, I. C., Rutsohn, J., St. John, T., Marrus, N., Parish-Morris, J., MacIntyre, L., Hampton, J., Pandey, J., Shen, M. D., Botteron, K. N., Estes, A. M., Dager, S. R., Hazlett, H. C., Pruett, J. R., Schultz, R. T., Zwaigenbaum, L., … Elison, J. T. (2022). A data-driven approach in an unbiased sample reveals equivalent sex ratio of autism spectrum disorder–associated impairment in early childhood. Biological Psychiatry, Brain Development and Communication in Autism Spectrum Disorder, 92(8), 654–662. https://doi.org/10.1016/j.biopsych.2022.05.027

Chaxiong, P., Burrows, C., Botteron, K. N., Dager, S. R., Estes, A. M., Hazlett, H. C., Schultz, R. T., Zwaigenbaum, L., Piven, J., Wolff, J., Piven, J., Hazlett, H. C., Chappell, C., Shen, M., Swanson, M., Dager, S., Estes, A., Shaw, D., John, T. St., … IBIS Network. (2022). Relations of restricted and repetitive behaviors to social skills in toddlers with autism. Journal of Autism and Developmental Disorders, 52(4), 1423–1434. https://doi.org/10.1007/s10803-021-05014-8

Gao, Y., Xiong, Z., Fazlollahi, A., Nestor, P. J., Vegh, V., Nasrallah, F., Winter, C., Pike, G. B., Crozier, S., Liu, F., & Sun, H. (2022). Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enhanced deep neural networks. NeuroImage, 259, 119410. https://doi.org/10.1016/j.neuroimage.2022.119410

Girault, J. B., Donovan, K., Hawks, Z., Talovic, M., Forsen, E., Elison, J. T., Shen, M. D., Swanson, M. R., Wolff, J. J., Kim, S. H., Nishino, T., Davis, S., Snyder, A. Z., Botteron, K. N., Estes, A. M., Dager, S. R., Hazlett, H. C., Gerig, G., McKinstry, R., … for the IBIS Network. (2022). Infant visual brain development and inherited genetic liability in autism. American Journal of Psychiatry, 179(8), 573–585. https://doi.org/10.1176/appi.ajp.21101002

Hosseinpour, Z., Jonkman, L., Oladosu, O., Pridham, G., Pike, G. B., Inglese, M., Geurts, J. J., & Zhang, Y. (2022). Texture analysis in brain T2 and diffusion MRI differentiates histology-verified grey and white matter pathology types in multiple sclerosis. Journal of Neuroscience Methods, 379, 109671. https://doi.org/10.1016/j.jneumeth.2022.109671

Oladosu, O., Liu, W.-Q., Brown, L., Pike, B. G., Metz, L. M., & Zhang, Y. (2022). Advanced diffusion MRI and image texture analysis detect widespread brain structural differences between relapsing-remitting and secondary progressive multiple sclerosis. Frontiers in Human Neuroscience, 16. https://doi.org/10.3389/fnhum.2022.944908

Pike, G. B. (2022, May). Regional variation in the linear relationship between breath-hold cerebrovascular reactivity and BOLD fMRI activation. International Society for Magnetic Resonance in Medicine. ISMRM 2022: Joint Annual Meeting ISMRM-ESMRMB & International Society for Magnetic Resonance in Medicine 31st Annual Meeting. https://hdl.handle.net/1959.11/64389

Plate, S., Yankowitz, L., Resorla, L., Swanson, M. R., Meera, S. S., Estes, A., Marrus, N., Cola, M., Petrulla, V., Faggen, A., Pandey, J., Paterson, S., Pruett, J. R., Hazlett, H., Dager, S., St. John, T., Botteron, K., Zwaigenbaum, L., Piven, J., … IBIS Network. (2022). Infant vocalizing and phenotypic outcomes in autism: Evidence from the first 2 years. Child Development, 93(2), 468–483. https://doi.org/10.1111/cdev.13697

Raheem, J., Sliz, E., Shin, J., Holmes, M. V., Pike, G. B., Richer, L., Gaudet, D., Paus, T., & Pausova, Z. (2022). Visceral adiposity is associated with metabolic profiles predictive of type 2 diabetes and myocardial infarction. Communications Medicine, 2(1), 81. https://doi.org/10.1038/s43856-022-00140-5

Ravi, S., Bradshaw, A., Abdi, H., Meera, S. S., Parish-Morris, J., Yankowitz, L., Paterson, S., Dager, S. R., Burrows, C. A., Chappell, C., St. John, T., Estes, A. M., Piven, J., Swanson, M. R., & The IBIS Network. (2022). Are early social communication skills a harbinger for language development in infants later diagnosed autistic? —A longitudinal study using a standardized social communication assessment. Frontiers in Communication, 7. https://doi.org/10.3389/fcomm.2022.977724

Shen, M. D., Swanson, M. R., Wolff, J. J., Elison, J. T., Girault, J. B., Kim, S. H., Smith, R. G., Graves, M. M., Weisenfeld, L. A. H., Flake, L., MacIntyre, L., Gross, J. L., Burrows, C. A., Fonov, V. S., Collins, D. L., Evans, A. C., Gerig, G., McKinstry, R. C., Pandey, J., … for the IBIS Network. (2022). Subcortical brain development in autism and fragile x syndrome: Evidence for dynamic, age- and disorder-specific trajectories in infancy. American Journal of Psychiatry, 179(8), 562–572. https://doi.org/10.1176/appi.ajp.21090896

Sønderby, I. E., Ching, C. R. K., Thomopoulos, S. I., Van Der Meer, D., Sun, D., Villalon‐Reina, J. E., Agartz, I., Amunts, K., Arango, C., Armstrong, N. J., Ayesa‐Arriola, R., Bakker, G., Bassett, A. S., Boomsma, D. I., Bülow, R., Butcher, N. J., Calhoun, V. D., Caspers, S., Chow, E. W. C., … for the ENIGMA 22q11.2 Deletion Syndrome Working Group. (2022). Effects of copy number variations on brain structure and risk for psychiatric illness: Large‐scale studies from the ENIGMA working groups on CNVs. Human Brain Mapping, 43(1), 300–328. https://doi.org/10.1002/hbm.25354

Sossi, V. (2022, September). Effect of exercise on brain metabolism and energetics in PD. 2022 International Congress. IPMDS2022: International Parkinson and Movement Disorder Society International Congress. https://hdl.handle.net/1959.11/64390

Stallworthy, I. C., Lasch, C., Berry, D., Wolff, J. J., Pruett, J. R., Marrus, N., Swanson, M. R., Botteron, K. N., Dager, S. R., Estes, A. M., Hazlett, H. C., Schultz, R. T., Zwaigenbaum, L., Piven, J., & Elison, J. T. (2022). Variability in responding to joint attention cues in the first year is associated with autism outcome. Journal of the American Academy of Child & Adolescent Psychiatry, 61(3), 413–422. https://doi.org/10.1016/j.jaac.2021.03.023

Sung, S., Fenoglio, A., Wolff, J. J., Schultz, R. T., Botteron, K. N., Dager, S. R., Estes, A. M., Hazlett, H. C., Zwaigenbaum, L., Piven, J., Elison, J. T., Piven, J., Hazlett, H. C., Chappell, C., Dager, S., Estes, A., Shaw, D., Botteron, K., McKinstry, R., … Gu, H. (2022). Examining the factor structure and discriminative utility of the Infant Behavior Questionnaire–Revised in infant siblings of autistic children. Child Development, 93(5), 1398–1413. https://doi.org/10.1111/cdev.13781

Tagge, I. J., Leppert, I. R., Fetco, D., Campbell, J. S., Rudko, D. A., Brown, R. A., Stikov, N., Pike, G. B., Giacomini, P. S., Arnold, D. L., & Narayanan, S. (2022). Permanent tissue damage in multiple sclerosis lesions is associated with reduced pre-lesion myelin and axon volume fractions. Multiple Sclerosis Journal, 28(13), 2027–2037. https://doi.org/10.1177/13524585221110585

Yankowitz, L. D., Petrulla, V., Plate, S., Tunc, B., Guthrie, W., Meera, S. S., Tena, K., Pandey, J., Swanson, M. R., Pruett, J. R., Cola, M., Russell, A., Marrus, N., Hazlett, H. C., Botteron, K., Constantino, J. N., Dager, S. R., Estes, A., Zwaigenbaum, L., … The IBIS Network. (2022). Infants later diagnosed with autism have lower canonical babbling ratios in the first year of life. Molecular Autism, 13(1), 28. https://doi.org/10.1186/s13229-022-00503-8